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1

Signatures of mutational processes in human cancer

Alexandrov, Ludmil B., Nik-Zainal, Serena, Wedge, David C., Aparicio, Samuel A. J. R., Behjati, Sam, Biankin, Andrew V., Bignell, Graham R., Bolli, Niccolò, Borg, Ake, Børresen-Dale, Anne-Lise, Boyaul

Journal:

Year:

2013

Language:

english

File:

PDF, 2.50 MB

english, 2013

2

The Implications of Clonal Genome Evolution for Cancer Medicine

Aparicio, Samuel, Caldas, Carlos

Journal:

Boston Medical and Surgical Journal

Year:

2013

Language:

english

File:

PDF, 595 KB

english, 2013

3

Genomic structure and sequence of the fugu rubripes glucose-6-phosphate dehydrogenase gene (G6PD)

Philip J. Mason, David J. Stevens, Lucio Luzzatto, Sydney Brenner, Samuel Aparicio

Journal:

Year:

1995

Language:

english

File:

PDF, 523 KB

english, 1995

4

A new genome-driven integrated classification of breast cancer and its implications

Dawson, Sarah-Jane, Rueda, Oscar M, Aparicio, Samuel, Caldas, Carlos

Journal:

The EMBO Journal

Year:

2013

Language:

english

File:

PDF, 1.04 MB

english, 2013

5

EXPRESS: Classical Least Squares-Assisted MIR Laser Spectroscopy Detection of High Explosives on Fabrics

Pacheco-Londoño, Leonardo C, Aparicio-Bolaño, Joaquin A, Galán-Freyle, Nataly J, Román-Ospino, Andrés D, Ruiz-Caballero, José L, Hernandez, Samuel P

Journal:

Applied Spectroscopy

Year:

2018

Language:

english

File:

PDF, 1.99 MB

english, 2018

6

Effect of Oral Nutritional Supplements with Sucromalt and Isomaltulose versus Standard Formula on Glycaemic Index, Entero-Insular Axis Peptides and Subjective Appetite in Patients with Type 2 Diabetes: A Randomised Cross-Over Study

Dávila, Lisse Angarita, Bermúdez, Valmore, Aparicio, Daniel, Céspedes, Virginia, Escobar, Ma. Cristina, Durán-Agüero, Samuel, Cisternas, Silvana, de Assis Costa, Jorge, Rojas-Gómez, Diana, Reyna, Nadi

Journal:

Year:

2019

Language:

english

File:

PDF, 1.40 MB

english, 2019

7

The cryo-EM Structure of Thermotoga maritima β-Galactosidase: Quaternary Structure Guides Protein Engineering

Míguez Amil, Samuel, Jiménez-Ortega, Elena, Ramírez-Escudero, Mercedes, Talens-Perales, David, Marín-Navarro, Julia, Polaina, Julio, Sanz-Aparicio, Julia, Fernandez-Leiro, Rafael

Journal:

ACS Chemical Biology

Year:

2019

File:

PDF, 7.44 MB

2019

8

Progressive glomerular toxicity of ifosfamide in children

Prasad, Vinod K., Lewis, Ian J., Aparicio, Samuel R., Heney, David, Hale, Juliet P., Bailey, Clifford C., Kinsey, Sally E.

Journal:

Medical and Pediatric Oncology

Year:

1996

Language:

english

File:

PDF, 838 KB

english, 1996

9

Intensity calibration and automated cell cycle gating for high-throughput image-based siRNA screens of mammalian cells

Steven S. S. Poon, Jason T. Wong, Darren N. Saunders, Qianli C. Ma, Steven McKinney, John Fee, Samuel A. J. R. Aparicio

Journal:

Cytometry Part A

Year:

2008

Language:

english

File:

PDF, 694 KB

english, 2008

10

Reactions of 1,2-diaza-1,3-dienes with thiol derivatives: a versatile construction of nitrogen/sulfur containing heterocycles

Orazio A. Attanasi, Paolino Filippone, Samuele Lillini, Fabio Mantellini, Simona Nicolini, Jesús M. de los Santos, Roberto Ignacio, Domitila Aparicio, Francisco Palacios

Journal:

Year:

2008

Language:

english

File:

PDF, 461 KB

english, 2008

11

5517597 Convulutional expert neural system (conexns)

Aparicio Manue, E. Otto Samuel

Journal:

Expert Systems with Applications

Year:

1996

Language:

english

File:

PDF, 104 KB

english, 1996

12

Uptake and disposal of bsa-coated latex particles by the rat mesangium: Reaction with subsequently administered heterologous antiserum

Dr. Nigel P. Goode, Alex M. Davison, Gerald Gowland, Samuel R. Aparicio, Michael Shires

Journal:

The Journal of Pathology

Year:

1985

Language:

english

File:

PDF, 1.15 MB

english, 1985

13

Does massively parallel DNA resequencing signify the end of histopathology as we know it?

Samuel AJR Aparicio, David G Huntsman

Journal:

The Journal of Pathology

Year:

2010

Language:

english

File:

PDF, 290 KB

english, 2010

14

Molecular evolution and domain structure of plasminogen-related growth factors (HGF/SF and HGF1/MSP)

Luis Enrique Donate, N. Srinivasan, R. Sowdhamini, Ermanno Gherardi, Tom L. Blundell, Samuel Aparicio

Journal:

Protein Science

Year:

1994

Language:

english

File:

PDF, 11.35 MB

english, 1994

15

Are columnar cell lesions the earliest histologically detectable non-obligate precursor of breast cancer?

Gulisa Turashvili, Malcolm Hayes, Blake Gilks, Peter Watson, Samuel Aparicio

Journal:

Virchows Archiv

Year:

2008

Language:

english

File:

PDF, 332 KB

english, 2008

16

Columnar cell lesions, mammographic density and breast cancer risk

Gulisa Turashvili, Steven McKinney, Lisa Martin, Karen A. Gelmon, Peter Watson, Norman Boyd, Samuel Aparicio

Journal:

Breast Cancer Research and Treatment

Year:

2009

Language:

english

File:

PDF, 356 KB

english, 2009

17

Bone regeneration mediated by biomimetic mineralization of a nanofiber matrix

Alvaro Mata, Yanbiao Geng, Karl J. Henrikson, Conrado Aparicio, Stuart R. Stock, Robert L. Satcher, Samuel I. Stupp

Journal:

Year:

2010

Language:

english

File:

PDF, 2.14 MB

english, 2010

18

MicroRNA expression profile in common bean (Phaseolus vulgaris) under nutrient deficiency stresses and manganese toxicity

Oswaldo Valdés-López, S. Samuel Yang, Rosaura Aparicio-Fabre, Peter H. Graham, José Luis Reyes, Carroll P. Vance, Georgina Hernández

Journal:

New Phytologist

Year:

2010

Language:

english

File:

PDF, 489 KB

english, 2010

19

10.1038/35003601

Russ, Andreas P., Wattler, Sigrid, Colledge, William H., Aparicio, Samuel A. J. R., Carlton, Mark B. L., Pearce, Jonathan J., Barton, Sheila C., Surani, M. Azim, Ryan, Kenneth, Nehls, Michael C., Wils

Journal:

Year:

2000

Language:

english

File:

PDF, 438 KB

english, 2000

20

Open-source work even more vital to genome project than to software

Russ, Andreas P., Aparicio, Samuel A. J. R., Carlton, Mark B. L.

Journal:

Year:

2000

Language:

english

File:

PDF, 52 KB

english, 2000

21

How good a model is the Fugu genome?

Aparicio, Samuel, Brenner, Sydney

Journal:

Year:

1997

File:

PDF, 281 KB

1997

22

CancerThe molecular outlook

Caldas, Carlos, Aparicio, Samuel A. J.

Journal:

Year:

2002

Language:

english

File:

PDF, 53 KB

english, 2002

23

10.1038/75949

Aparicio, Samuel A J R

Journal:

Nature Genetics

Year:

2000

Language:

english

File:

PDF, 189 KB

english, 2000

24

Exploding vertebrate genomes

Aparicio, Samuel

Journal:

Nature Genetics

Year:

1998

File:

PDF, 388 KB

1998

25

Organization of the Fugu rubripes Hox clusters: evidence for continuing evolution of vertebrate Hox complexes

Aparicio, Samuel, Hawker, Kelvin, Cottage, Amanda, Mikawa, Yoshikazu, Zuo, Lin, Venkatesh, Byrappa, Chen, Elson, Krumlauf, Robb, Brenner, Sydney

Journal:

Nature Genetics

Year:

1997

File:

PDF, 609 KB

1997

26

A method for quantifying normal human mammary epithelial stem cells with in vivo regenerative ability

Eirew, Peter, Stingl, John, Raouf, Afshin, Turashvili, Gulisa, Aparicio, Samuel, Emerman, Joanne T, Eaves, Connie J

Journal:

Nature Medicine

Year:

2008

Language:

english

File:

PDF, 407 KB

english, 2008

27

A self-assembly pathway to aligned monodomain gels

Zhang, Shuming, Greenfield, Megan A., Mata, Alvaro, Palmer, Liam C., Bitton, Ronit, Mantei, Jason R., Aparicio, Conrado, de la Cruz, Monica Olvera, Stupp, Samuel I.

Journal:

Nature Materials

Year:

2010

Language:

english

File:

PDF, 1.95 MB

english, 2010

28

Isolation and characterization of a Pufferfish MLL (Mixed lineage leukemia)-like gene (fMll) reveals evolutionary conservation in vertebrate genes related to Drosophila trithorax

Caldas, Carlos, Kim, Myeong-Hee, MacGregor, Angus, Cain, David, Aparicio, Samuel, Wiedemann, Leanne M

Journal:

Year:

1998

Language:

english

File:

PDF, 599 KB

english, 1998

29

MLL2, the second human homolog of the Drosophila trithorax gene, maps to 19q13.1 and is amplified in solid tumor cell lines

Huntsman, David G, Chin, Suet-Feung, Muleris, Martine, Batley, Sarah J, Collins, V P, Wiedemann, Leanne M, Aparicio, Samuel, Caldas, Carlos

Journal:

Year:

2000

Language:

english

File:

PDF, 397 KB

english, 2000

30

Cell Memory and Cancer – The Story of the Trithorax and Polycomb Group Genes

Carlos Caldas, Samuel Aparicio

Journal:

Cancer and Metastasis Reviews

Year:

1999

Language:

english

File:

PDF, 90 KB

english, 1999

31

Small is beautiful: comparative genomics with the pufferfish (Fugu rubripes)

Greg Elgar, Richard Sandford, Samuel Aparicio, Alexander Macrae, Byrappa Venkatesh, Sydney Brenner

Journal:

Trends in Genetics

Year:

1996

Language:

english

File:

PDF, 546 KB

english, 1996

32

Nucleic acid quantity and quality from paraffin blocks: Defining optimal fixation, processing and DNA/RNA extraction techniques

Gulisa Turashvili, Winnie Yang, Steven McKinney, Steve Kalloger, Nadia Gale, Ying Ng, Katie Chow, Lynda Bell, Julie Lorette, Melinda Carrier, Margaret Luk, Samuel Aparicio, David Huntsman, Stephen Yip

Journal:

Experimental and Molecular Pathology

Year:

2012

Language:

english

File:

PDF, 1.58 MB

english, 2012

33

Vertebrate evolution: recent perspectives from fish

Samuel Aparicio

Journal:

Trends in Genetics

Year:

2000

Language:

english

File:

PDF, 103 KB

english, 2000

34

Expression microarray reproducibility is improved by optimising purification steps in RNA amplification and labelling

Ali Naderi, Ahmed A Ahmed, Nuno L Barbosa-Morais, Samuel Aparicio, James D Brenton, Carlos Caldas

Journal:

Year:

2004

Language:

english

File:

PDF, 647 KB

english, 2004

35

Inter-observer reproducibility of HER2 immunohistochemical assessment and concordance with fluorescentin situhybridization (FISH): pathologist assessment compared to quantitative image analysis

Gulisa Turashvili, Samuel Leung, Dmitry Turbin, Kelli Montgomery, Blake Gilks, Rob West, Melinda Carrier, David Huntsman, Samuel Aparicio

Journal:

Year:

2009

Language:

english

File:

PDF, 603 KB

english, 2009

36

Growth of Ag, Au, Cu, and Pt nanostructures on surfaces by micropatterned laser-image formations

Pacheco-Londono, Leonardo C., Aparicio-Bolaño, Joaquín, Primera-Pedrozo, Oliva M., Hernandez-Rivera, Samuel P.

Journal:

Year:

2011

Language:

english

File:

PDF, 837 KB

english, 2011

37

Raman Microscopy of Human Embryonic Stem Cells Exposed to Heat and Cold Stress

Schulze, H. Georg, Konorov, Stanislav O., Aparicio, Samuel A., Piret, James M., Blades, Michael W., Turner, Robin F. B.

Journal:

Applied Spectroscopy

Year:

2011

Language:

english

File:

PDF, 1.24 MB

english, 2011

38

Raman Microscopy-Based Cytochemical Investigations of Potential Niche-Forming Inhomogeneities Present in Human Embryonic Stem Cell Colonies

Konorov, Stanislav O., Schulze, H. Georg, Piret, James M., Aparicio, Samuel A., Turner, Robin F. B., Blades, Michael W.

Journal:

Applied Spectroscopy

Year:

2011

Language:

english

File:

PDF, 2.34 MB

english, 2011

39

Distinctcis-Essential Modules Direct the Time–Space Pattern of thePax6Gene Activity

Birgitta Kammandel, Kamal Chowdhury, Anastassia Stoykova, Samuel Aparicio, Sydney Brenner, Peter Gruss

Journal:

Developmental Biology

Year:

1999

Language:

english

File:

PDF, 1.05 MB

english, 1999

40

Imprinted Expression of Neuronatin from Modified BAC Transgenes Reveals Regulation by Distinct and Distant Enhancers

Rosalind M. John, Samuel A.J.R. Aparicio, Justin F-X. Ainscough, Katharine L. Arney, Sanjeev Khosla, Kelvin Hawker, Kathy J. Hilton, Sheila C. Barton, M.Azim Surani

Journal:

Developmental Biology

Year:

2001

Language:

english

File:

PDF, 913 KB

english, 2001

41

The PufferfishSLP-1Gene, a New Member of theSCL/TAL-1Family of Transcription Factors

Berthold Göttgens, James G.R Gilbert, Linda M Barton, Samuel Aparicio, Kelvin Hawker, Shailesh Mistry, Mark Vaudin, Andrew King, David Bentley, Greg Elgar, Anthony R Green

Journal:

Year:

1998

Language:

english

File:

PDF, 669 KB

english, 1998

42

Mineralization of peptide amphiphile nanofibers and its effect on the differentiation of human mesenchymal stem cells

Timothy D. Sargeant, Conrado Aparicio, Joshua E. Goldberger, Honggang Cui, Samuel I. Stupp

Journal:

Acta Biomaterialia

Year:

2012

Language:

english

File:

PDF, 1.97 MB

english, 2012

43

p53: A New Kingpin in the Stem Cell Arena

Samuel Aparicio, Connie J. Eaves

Journal:

Year:

2009

Language:

english

File:

PDF, 70 KB

english, 2009

44

Kisspeptins and GPR54—The new biology of the mammalian GnRH axis

Samuel A.J.R. Aparicio

Journal:

Cell Metabolism

Year:

2005

Language:

english

File:

PDF, 208 KB

english, 2005

45

Opening Pandora's Box — the new biology of driver mutations and clonal evolution in cancer as revealed by next generation sequencing

Qianli C Ma, Catherine A Ennis, Samuel Aparicio

Journal:

Current Opinion in Genetics & Development

Year:

2012

Language:

english

File:

PDF, 385 KB

english, 2012

46

PEDF and the serpins: Phylogeny, sequence conservation, and functional domains

Joyce Tombran-Tink, Samuel Aparicio, Xuming Xu, Amber R. Tink, Nuria Lara, Supriya Sawant, Colin J. Barnstable, Samuel Shao-Min Zhang

Journal:

Journal of Structural Biology

Year:

2005

Language:

english

File:

PDF, 4.37 MB

english, 2005

47

Transcriptome Analysis of the Normal Human Mammary Cell Commitment and Differentiation Process

Afshin Raouf, Yun Zhao, Karen To, John Stingl, Allen Delaney, Mary Barbara, Norman Iscove, Steven Jones, Steven McKinney, Joanne Emerman, Samuel Aparicio, Marco Marra, Connie Eaves

Journal:

Year:

2008

Language:

english

File:

PDF, 1.37 MB

english, 2008

48

Bombesin receptor subtype-3 (BRS-3), a novel candidate as therapeutic molecular target in obesity and diabetes

Ramos-Álvarez, Irene, Martín-Duce, Antonio, Moreno-Villegas, Zaida, Sanz, Raúl, Aparicio, César, Portal-Núñez, Sergio, Mantey, Samuel A., Jensen, Robert T., González, Nieves

Journal:

Molecular and Cellular Endocrinology

Year:

2013

Language:

english

File:

PDF, 800 KB

english, 2013

49

Straightforward Access to Pyrazines, Piperazinones, and Quinoxalines by Reactions of 1,2-Diaza-1,3-butadienes with 1,2-Diamines under Solution, Solvent-Free, or Solid-Phase Conditions

Aparicio, Domitila, Attanasi, Orazio A., Filippone, Paolino, Ignacio, Roberto, Lillini, Samuele, Mantellini, Fabio, Palacios, Francisco, de los Santos, Jesús M.

Journal:

Journal of Organic Chemistry

Year:

2006

Language:

english

File:

PDF, 181 KB

english, 2006

50

SPIE Proceedings [SPIE SPIE Defense, Security, and Sensing - Baltimore, Maryland, USA (Monday 29 April 2013)] Active and Passive Signatures IV - Dependence of detection limits on angular alignment, substrate type and surface concentration in active mode standoff IR

Ortega-Zuñiga, Carlos A., Galán-Freyle, Nataly Y., Castro-Suarez, John R., Aparicio-Bolaño, Joaquín, Pacheco-Londoño, Leonardo C., Hernández-Rivera, Samuel P., Gilbreath, G. Charmaine, Hawley, Chadwic

Year:

2013

Language:

english

File:

PDF, 1.16 MB

english, 2013

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